Your morning cortisol is high. This is a good sign if the sample was taken around one hour after waking up. This means your body still has energy. Morning cortisol spike should be high like yours. If you can obtain cortisol curve, this would be more informative.
TSH is somewhat high. Optimally it should be between 1.3 - 1.8 and your FT3 is low. This makes you subclinical hypothyroid.
I used dr. James Wilson program to re-balance intestinal flora. All the remedies are available at his web site. http://www.adrenalfatigue.org.
If you search this forum under my name, you will find the program description. One of the components has Colloidal Silver . Dr. Wilson says that it is very effective against candida.
You may check Ask Humaworm. The humaworm contains 25 various herbs that kill pathogenic bacteria.